CDS
| Accession Number | TCMCG057C33946 |
| gbkey | CDS |
| Protein Id | XP_018440959.1 |
| Location | join(26979114..26979604,26979928..26979983,26980128..26980155,26980345..26980426,26980512..26980568,26980670..26980725,26980913..26981144,26981381..26981464,26981548..26981622,26981928..26982017,26982390..26982454,26982542..26982740,26982825..26982913,26982998..26983112,26983195..26983236) |
| Gene | LOC108813030 |
| GeneID | 108813030 |
| Organism | Raphanus sativus |
Protein
| Length | 586aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA344915 |
| db_source | XM_018585457.1 |
| Definition | PREDICTED: RNA-binding protein 39 isoform X2 [Raphanus sativus] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | linker between RRM2 and RRM3 domains in RBM39 protein |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko03041 [VIEW IN KEGG] |
| KEGG_ko |
ko:K13091
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway | - |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005654 [VIEW IN EMBL-EBI] GO:0016604 [VIEW IN EMBL-EBI] GO:0016607 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044451 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGACTTTGATGAGTATGACTACTTAGAGAAGACAGTTGAGAATCCTCAGCTGGAGAACGAAGTTGGAAATGGTGGTGGGGATGAGAAACCCAAATCTGAAGTGAAAGAGCGGAGTAGAAGCTCAAGGCATAGGAGTGATGAAGACGATGATGGTCGGCGTTCTAAGCGCTCGAGGTCCCACCACCGTTCACGATCTAGAGACAGAGAAAGGGATAGGCATAGAAGTAGCCGGGACCACAGAGAAAGAGAGAGAGGTGGTAGGGATCGCGAGAAGGATAGAGATAAAGAAGAAAGAAATGGGAAAGAGAGGGAAGGGGGCAAAGACAAGGATCGTGACAGTAAAGTGCGTGGCCATGAAAAAGATCGGGACAGAGATCGATCACGTCGAAGCAGAAGTAGATCAGAGAGACGTCGGAGTCAGGAAAGAGAAAAGAGCCAGGAGATAGAAACTAAGGAAAGAGACACCAAGGACCGTGATAGAGATCGCAGGTTCATAATGCTATTAGGTTCATTGGTATTGCCTTCTGTACAACTTGATGGGGCTCTTCCCTGCAGGGCCATCTCATGCTTCACACGCCACAAAGATAAAAAGGAGGATAAAGTAGAGCCTGAGGCTGATCCTGAAAGAGACCAGAGGACAGTTTTTGCCTATCAGATTGCTTTGAGGGCAACTGAAAGGGATGTTTATGAATTCTTCTCGAGAGCTGGAAAGGTACGAGATGTGCGGATAATTATGGATCGAATTTCCAGGCGTTCAAGAGGAATCGGGTATGTGGAGTTTTATGAAACAATGTCAGTCCCTATGGCTATTGCTCTATCTGGACAGCCTCTTCTTGGTCAGCCTGTTATGGTAAAACCATCTGAAGCTGAGAAGAATCTTGTTCAGTCAACAACTGCTGCTGCTGGAGCAGGAGGGATGCTGGGTCCCTATTCTGGTGGAGCCAGACGTCTTTATGTTGGTAACCTGCATATTAACATGTCAGAAGATGATCTGCGAAAGGTTTTTGAATCATTTGGGAGTGTCGAGCTGGTACAAGTACCTCGTGACGAAACTGGCCATTGCAAAGGATTTGGTTTTGTTCAGTTTGCTCGCCTGGAGGATGCTAGGAATGCAGTGAATCTGAATGGGCAGTTGGAGATTGCAGGTCGTGCAATCAAGGTGTCAGCTGTAACAGATCAAACTGAAGTCCCAGACGCTGGACAAGCGCAAAACACGGGTGATCTGGATGATGATGATGGGGCGGGCCTGTCTCTGAATGCACAATCGCGGGCTGCACTCATGATGAAGCTCGATCGCAGTGGAACTGCATCAAGCACTGGCCTTACTGCAGTTCCTTCTATTCTCGGTGCAACTTCGACCGTCTCTCCGCTTGTGGCTCCTCTTGTACAAGGGGGTTTCCCTGCTGTTGCTGGACTCGCAGGGCTCGGTGTAAATGTTCCAGCTGTTGTCGACCCAGTTGGTGTCCCCAGCGAATGTCTACTGCTTAAAAACATGTTTGATCCATCCACAGAGACTGAACTTAATTTTGACGAGGACATCGAGGAAGATGTTCGAGATGAATGCTCCAAGTTCGGAAAACTGAATCATATCTTTGTTGACAAGAACAGCATGGGTTTTGTCTACTTGAGATTTGAGAATGCACAAGCAGCAATGGGAGCGCAACGTGCTCTCCATGGAAGATGGTTTGCCGGGAAGATGATTACAGCTACTTACATGACTACAGAGACTTACGAGGCCAAGTTCCCTCAGAGTAAGTAG |
| Protein: MDFDEYDYLEKTVENPQLENEVGNGGGDEKPKSEVKERSRSSRHRSDEDDDGRRSKRSRSHHRSRSRDRERDRHRSSRDHRERERGGRDREKDRDKEERNGKEREGGKDKDRDSKVRGHEKDRDRDRSRRSRSRSERRRSQEREKSQEIETKERDTKDRDRDRRFIMLLGSLVLPSVQLDGALPCRAISCFTRHKDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSRGIGYVEFYETMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGGARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGHCKGFGFVQFARLEDARNAVNLNGQLEIAGRAIKVSAVTDQTEVPDAGQAQNTGDLDDDDGAGLSLNAQSRAALMMKLDRSGTASSTGLTAVPSILGATSTVSPLVAPLVQGGFPAVAGLAGLGVNVPAVVDPVGVPSECLLLKNMFDPSTETELNFDEDIEEDVRDECSKFGKLNHIFVDKNSMGFVYLRFENAQAAMGAQRALHGRWFAGKMITATYMTTETYEAKFPQSK |